Structure

L-RNA 2'-OTBS U amidite

CAS
144490-31-3
Catalog Number
ACM144490313
Category
Amidites
Molecular Weight
861.05
Molecular Formula
C45H61N4O9PSi

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Specification

Synonyms
(2S,3S,4S,5S)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)-4-((tert-butyldimethylsilyl)oxy)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite
IUPAC Name
3-[[(2R,3R,4R,5R)-2-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-4-[tert-butyl(dimethyl)silyl]oxy-5-(2,4-dioxopyrimidin-1-yl)oxolan-3-yl]oxy-[di(propan-2-yl)amino]phosphanyl]oxypropanenitrile
SMILES
CC(N(C(C)C)P(O[C@H]1[C@H](COC(C2=CC=C(OC)C=C2)(C3=CC=C(OC)C=C3)C4=CC=CC=C4)O[C@H](N(C(N5)=O)C=CC5=O)[C@H]1O[Si](C)(C(C)(C)C)C)OCCC#N)C
InChI
1S/C45H61N4O9PSi/c1-31(2)49(32(3)4)59(55-29-15-27-46)57-40-38(56-42(48-28-26-39(50)47-43(48)51)41(40)58-60(10,11)44(5,6)7)30-54-45(33-16-13-12-14-17-33,34-18-22-36(52-8)23-19-34)35-20-24-37(53-9)25-21-35/h12-14,16-26,28,31-32,38,40-42H,15,29-30H2,1-11H3,(H,47,50,51)/t38-,40-,41-,42-,59?/m1/s1
InChI Key
SKNLXHRBXYGJOC-ZMHKPELYSA-N
Storage
Inert atmosphere, store in freezer, under -20°C
Complexity
1430
Covalently-Bonded Unit Count
1
Defined Atom Stereocenter Count
4
Defined Bond Stereocenter Count
0
Formal Charge
0
H-Bond Acceptor
11
H-Bond Donor
1
Heavy Atom Count
60
Isomeric SMILES
CC(C)N(C(C)C)P(OCCC#N)O[C@@H]1[C@H](O[C@H]([C@@H]1O[Si](C)(C)C(C)(C)C)N2C=CC(=O)NC2=O)COC(C3=CC=CC=C3)(C4=CC=C(C=C4)OC)C5=CC=C(C=C5)OC
PubChem ID
10898199
Rotatable Bond Count
20
Undefined Atom Stereocenter Count
1
Undefined Bond Stereocenter Count
0

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