Structure

DNA C(Bz) 3'-DMTr 5'-amidite

CAS
140712-83-0
Catalog Number
ACM140712830-1
Category
Amidites
Molecular Weight
849.91
Molecular Formula
C46H52N5O9P

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Specification

Synonyms
Rev dC(Bz)-5'-amidite; ((2R,3S,5R)-5-(4-Benzamido-2-oxopyrimidin-1(2H)-yl)-3-(bis(4-methoxyphenyl)(phenyl)methoxy)tetrahydrofuran-2-yl)methyl (2-cyanoethyl) diisopropylphosphoramidate
IUPAC Name
N-[1-[(2R,4S,5R)-4-[bis(4-methoxyphenyl)-phenylmethoxy]-5-[[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxymethyl]oxolan-2-yl]-2-oxopyrimidin-4-yl]benzamide
SMILES
O=C(N=C(C=C1)NC(C2=CC=CC=C2)=O)N1[C@H](O3)C[C@H](OC(C4=CC=C(OC)C=C4)(C5=CC=CC=C5)C6=CC=C(OC)C=C6)[C@H]3COP(OCCC#N)(N(C(C)C)C(C)C)=O
InChI
1S/C46H52N5O8P/c1-32(2)51(33(3)4)60(56-29-13-27-47)57-31-41-40(30-43(58-41)50-28-26-42(49-45(50)53)48-44(52)34-14-9-7-10-15-34)59-46(35-16-11-8-12-17-35,36-18-22-38(54-5)23-19-36)37-20-24-39(55-6)25-21-37/h7-12,14-26,28,32-33,40-41,43H,13,29-31H2,1-6H3,(H,48,49,52,53)/t40-,41+,43+,60?/m0/s1
InChI Key
OXUQZHDIUOKQGM-SALLYJDFSA-N
Appearance
Off-white solid
Storage
Inert atmosphere, 2-8°C
EC Number
689-912-3
Isomeric SMILES
CC(C)N(C(C)C)P(OCCC#N)OC[C@@H]1[C@H](C[C@@H](O1)N2C=CC(=NC2=O)NC(=O)C3=CC=CC=C3)OC(C4=CC=CC=C4)(C5=CC=C(C=C5)OC)C6=CC=C(C=C6)OC
MDL Number
MFCD08706365
Odor
Odorless
PubChem ID
15403759

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