Structure

5'-O-DMT-5-Ethynyl-2'-deoxyuridine 3'-CE phosphoramidite

CAS
188411-06-5
Catalog Number
ACM188411065-1
Category
Amidites
Molecular Weight
917.00
Molecular Formula
C50H57N6O9P

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Specification

Synonyms
DNA 5-CEtOM-C(Bz) amidite; (2R,3S,5R)-5-(4-benzamido-5-((2-cyanoethoxy)methyl)-2-oxopyrimidin-1(2H)-yl)-2-((bis(4-methoxyphenyl)(phenyl)methoxy)methyl)tetrahydrofuran-3-yl (2-cyanoethyl) diisopropylphosphoramidite
IUPAC Name
N-[1-[(2R,4S,5R)-5-[[bis(4-methoxyphenyl)-phenylmethoxy]methyl]-4-[2-cyanoethoxy-[di(propan-2-yl)amino]phosphanyl]oxyoxolan-2-yl]-5-(2-cyanoethoxymethyl)-2-oxopyrimidin-4-yl]benzamide
SMILES
C(OC[C@@H]1[C@@H](OP(N(C(C)C)C(C)C)OCCC#N)C[C@@](O1)(N2C=C(COCCC#N)C(NC(=O)C3=CC=CC=C3)=NC2=O)[H])(C4=CC=C(OC)C=C4)(C5=CC=C(OC)C=C5)C6=CC=CC=C6
InChI
1S/C50H57N6O9P/c1-35(2)56(36(3)4)66(63-30-14-28-52)65-44-31-46(55-32-38(33-61-29-13-27-51)47(54-49(55)58)53-48(57)37-15-9-7-10-16-37)64-45(44)34-62-50(39-17-11-8-12-18-39,40-19-23-42(59-5)24-20-40)41-21-25-43(60-6)26-22-41/h7-12,15-26,32,35-36,44-46H,13-14,29-31,33-34H2,1-6H3,(H,53,54,57,58)/t44-,45+,46+,66?/m0/s1
InChI Key
HWEIPTASDBKOJW-JICGRVMNSA-N
Storage
Inert atmosphere, 2-8°C
PubChem ID
155802498

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